All modules for which code is available
- pypesto.engine.base
- pypesto.engine.multi_process
- pypesto.engine.multi_thread
- pypesto.engine.single_core
- pypesto.engine.task
- pypesto.ensemble.covariance_analysis
- pypesto.ensemble.dimension_reduction
- pypesto.ensemble.ensemble
- pypesto.ensemble.util
- pypesto.hierarchical.base_parameter
- pypesto.hierarchical.base_problem
- pypesto.hierarchical.base_solver
- pypesto.hierarchical.inner_calculator_collector
- pypesto.hierarchical.ordinal.calculator
- pypesto.hierarchical.ordinal.parameter
- pypesto.hierarchical.ordinal.problem
- pypesto.hierarchical.ordinal.solver
- pypesto.hierarchical.relative.calculator
- pypesto.hierarchical.relative.problem
- pypesto.hierarchical.relative.solver
- pypesto.hierarchical.semiquantitative.calculator
- pypesto.hierarchical.semiquantitative.parameter
- pypesto.hierarchical.semiquantitative.problem
- pypesto.hierarchical.semiquantitative.solver
- pypesto.history.amici
- pypesto.history.base
- pypesto.history.csv
- pypesto.history.generate
- pypesto.history.hdf5
- pypesto.history.memory
- pypesto.history.optimizer
- pypesto.history.options
- pypesto.history.util
- pypesto.logging
- pypesto.objective.aesara.base
- pypesto.objective.aggregated
- pypesto.objective.amici.amici
- pypesto.objective.base
- pypesto.objective.finite_difference
- pypesto.objective.function
- pypesto.objective.jax.base
- pypesto.objective.julia.base
- pypesto.objective.julia.petabJl
- pypesto.objective.priors
- pypesto.objective.roadrunner.petab_importer_roadrunner
- pypesto.objective.roadrunner.road_runner
- pypesto.objective.roadrunner.roadrunner_calculator
- pypesto.objective.roadrunner.utils
- pypesto.optimize.ess.ess
- pypesto.optimize.ess.sacess
- pypesto.optimize.load
- pypesto.optimize.optimize
- pypesto.optimize.optimizer
- pypesto.optimize.options
- pypesto.petab.importer
- pypesto.predict.amici_predictor
- pypesto.predict.task
- pypesto.problem.base
- pypesto.problem.hierarchical
- pypesto.profile.approximate
- pypesto.profile.options
- pypesto.profile.profile
- pypesto.profile.profile_next_guess
- pypesto.profile.util
- pypesto.profile.validation_intervals
- pypesto.result.optimize
- pypesto.result.predict
- pypesto.result.profile
- pypesto.result.result
- pypesto.result.sample
- pypesto.sample.adaptive_metropolis
- pypesto.sample.adaptive_parallel_tempering
- pypesto.sample.diagnostics
- pypesto.sample.dynesty
- pypesto.sample.emcee
- pypesto.sample.metropolis
- pypesto.sample.parallel_tempering
- pypesto.sample.sample
- pypesto.sample.sampler
- pypesto.sample.util
- pypesto.select.misc
- pypesto.select.postprocessors
- pypesto.select.problem
- pypesto.startpoint.base
- pypesto.startpoint.latin_hypercube
- pypesto.startpoint.uniform
- pypesto.store.auto
- pypesto.store.hdf5
- pypesto.store.read_from_hdf5
- pypesto.store.save_to_hdf5
- pypesto.util
- pypesto.visualize.clust_color
- pypesto.visualize.dimension_reduction
- pypesto.visualize.ensemble
- pypesto.visualize.misc
- pypesto.visualize.model_fit
- pypesto.visualize.optimization_stats
- pypesto.visualize.optimizer_convergence
- pypesto.visualize.optimizer_history
- pypesto.visualize.ordinal_categories
- pypesto.visualize.parameters
- pypesto.visualize.profile_cis
- pypesto.visualize.profiles
- pypesto.visualize.reference_points
- pypesto.visualize.sampling
- pypesto.visualize.spline_approximation
- pypesto.visualize.waterfall