API reference

pypesto.engine

Engines

pypesto.ensemble

Ensemble

pypesto.hierarchical

Hierarchical

pypesto.hierarchical.ordinal

Ordinal and censored data integration

pypesto.hierarchical.relative

Relative data integration

pypesto.hierarchical.semiquantitative

Semi-quantitative data integration

pypesto.history

History

pypesto.logging

Logging

pypesto.objective

Objective

pypesto.objective.aesara

Aesara objective

pypesto.objective.jax

Jax objective

pypesto.objective.julia

Julia objective

pypesto.objective.roadrunner

RoadRunner objective

pypesto.optimize

Optimize

pypesto.petab

PEtab

pypesto.predict

Prediction

pypesto.problem

Problem

pypesto.profile

Profile

pypesto.profile.profile_next_guess

pypesto.result

Result

pypesto.sample

Sample

pypesto.select

Model Selection

pypesto.select.postprocessors

Process a model selection ModelProblem after calibration.

pypesto.startpoint

Startpoint

pypesto.store

Storage

pypesto.visualize

Visualize

pypesto.visualize.model_fit

Visualization of the model fit after optimization.