pyPESTO
v0.2.2
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Examples
Storage
Developer's guide
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Objective
Problem
Optimize
Profile
Sampling
Result
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pyPESTO
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Welcome to pyPESTO’s documentation!
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Welcome to pyPESTO’s documentation!
¶
Version: 0.2.2
Source code:
https://github.com/icb-dcm/pypesto
User's guide
Install and upgrade
Requirements
Install from PIP
Install from GIT
Upgrade
Install optional packages
Examples
Rosenbrock banana
Conversion reaction
Fixed parameters
AMICI Python example “Boehm”
Model import using the Petab format
Storage
A sampler study
MCMC sampling diagnostics
Definition of Priors:
Download the examples as notebooks
Storage
pyPESTO Problem
Parameter estimation
Sampling
Profiling
Developer's guide
Contribute
Contribute documentation
Contribute tests
Contribute code
Deploy
Versioning scheme
Creating a new release
Documentation
Requirements
Build the documentation
API reference
Objective
Problem
Optimize
Profile
Sampling
Result
Visualize
Engines
Startpoint
Storage
Logging
About
Release notes
0.2 series
0.1 series
0.0 series
Authors
Contact
License
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Indices and tables
¶
Index
Module Index
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v: v0.2.2
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